hhalignment.cpp:3539: MergeMasterSlave

[Licko0909]

Hi, I have an error problem like this:

This could be related to https://github.com/google-deepmind/alphafold/issues/705

My input cmd: ./run_alphafold.sh -d ./download -o ./output -u 2 -m model_1,model_2,model_3,model_4,model_5 -p monomer_ptm -i input/Luc8_2.fa -t 2022-10-01

[shiratorisasu]

Did you try small bfd instead of full by adding a line '-c reduced_dbs'?