Woody Fang issues

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                                            Woody Fang

Error when running the "interaction" step: "numpy.AxisError: first argument: axis 2 is out of bounds for array of dimension 2"

Hi, I am encounting this error when running snapHiC with a single cell hic contact dataset. I use Python=3.6.1 with the exact dependencies in the requirements. Here is a bug,...

Tuning the parameters (perc-zero, perc-undetected, pearson) for a relatively small dataset

Dear Chromosight developers: First I'd like to thank you guys for developing such an excellent tool to call loop, and it is undoubtedly one of the best and popular loop...