Zepeng (Phoenix) Mu

icon indicating a website link zepengmu.netlify.app icon indicating an email [email protected]

icon company BWH icon location Boston, MA icon location PhD in Genetics from University of Chicago, The Li Lab | B.S. in Biology, Univ. of Chinese Academy of Sciences

Results 24 comments of Zepeng (Phoenix) Mu

error addGeneIntegrationMatrix: formal argument "groupRNA" matched by multiple actual arguments

This error is not related to ArchR, in your code you specified `groupRNA` twice: ```r groupRNA = "celltype", # here groupList = groupList, addToArrow = FALSE, groupRNA = "BioClassification", #...

error addGeneIntegrationMatrix: formal argument "groupRNA" matched by multiple actual arguments

check you groupList

forcerun has no effect

I agree that when the intermediate file is there, snakemake does not need to check whether the original input file is there. In my case, I was trying to forcerun...

If warning, return of pbmclapply has different return format if length of X is 1

I think I have a similar issue. I am trying to generate a list of dataframes and rbind them: ```r out % Reduce("rbind", .) ``` The problem is when the...