Yunxia-li

core dumped: terminate called after throwing an instance of 'std::invalid_argument'

3

Hello: I had run quickmerge by the following commands: `nucmer -l 100 -prefix out contig.fasta pacbio_assemble.fasta` `delta-filter -r -q -l 10000 out.delta > outrq.delta` `quickmerge -d outrq.delta -q contig.fasta -r...

Velvet contig: WARN japsa.tools.bio.np.NPScarfCmd - Not found any legal SPAdes output folder,

4

Hello: I had a contigfile Mtctgs.fasta like : I got Mtctgs.fasta from **Velvet**, `>NODE_10906_length_1007_cov_71.668320 ATCGACTAGCTAGCTACGTCAGCATGCTAGCTCAGCTACGACTAGCATCAGCTCG` a bam file [email protected] computed from: `bwa mem [email protected] pacbio.fasta` And I ran this: `...

Hello : I had use conda install fastaindex; but I still got the eroor My command is : `./pyScaf.py -f assembly.fasta -n long-read.fasta -o mapped@pyS` Is there any problems with...