ggtree
ggtree copied to clipboard
facet_plot dates not displaying correctly
trafficstars
I'm aligning a tree to a set of data points to show relationship over time. My data set has sample number in the first column (corresponding to tree) and date in the second column (as.Date = TRUE). In the plot, the date is displayed as a number rather than date. Is there a way to adjust the contents of the X axis? I've tried adding "scale_x_date" in a variety of places and it just gave me errors.
`tree <- ggtree(phylo) + geom_tiplab()
d <- data.frame(label = dd$Number,
value = dd$Date.Collected)
p2 <- facet_plot(tree, panel = "Date Collected",
data = d,
geom = geom_point,
mapping = aes(x = value))+
theme_bw()
plot(p2)`
Prerequisites
- [x] Have you read Feedback and follow the guide?
- [x] make sure your are using the latest release version
- [x] read the documents
- [x] google your question/issue
Describe you issue
- [x] Make a reproducible example (e.g. 1)
- [x] your code should contain comments to describe the problem (e.g. what expected and actually happened?)
Ask in right place
- [x] for bugs or feature requests, post here (github issue)
- [x] for questions, please post to google group
reproducible example pls.