enrichplot
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Fail to install development version from github
Hi enrichplot team,
Thanks for offering such a great package for plotting enrichment analysis results!
When trying installing the development version of the package from github, using the following code (I updated my R version to 4.0.5 and started a new empty project in RStudio with renv before installing the package):
install.packages("devtools") devtools::install_github("YuLab-SMU/enrichplot")
I encountered the following error:
installing source package 'enrichplot' ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'enrichplot' finding HTML links ... done barplot.enrichResult html
cnetplot html
color_palette html
dotplot html
emapplot html
emapplot_cluster html
fortify html
ggtable html
goplot html
gsInfo html
gseadist html
gseaplot html
gseaplot2 html
gsearank html
heatplot html
pairwise_termsim html
finding level-2 HTML links ... doneplotting.clusterProfile html
pmcplot html
reexports html
ridgeplot html
treeplot html
upsetplot-methods html
** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location *** arch - i386 Error: package or namespace load failed for 'enrichplot' in library.dynam(lib, package, package.lib): DLL 'utf8' not found: maybe not installed for this architecture? Error: loading failed Execution halted *** arch - x64 ERROR: loading failed for 'i386'removing 'C:/Projects/test2/renv/library/R-4.0/x86_64-w64-mingw32/enrichplot' Warning messages: 1: In untar2(tarfile, files, list, exdir, restore_times) : skipping pax global extended headers 2: In untar2(tarfile, files, list, exdir, restore_times) : skipping pax global extended headers 3: In i.p(...) : installation of package ‘C:/Users/vecin/AppData/Local/Temp/RtmpAXm8rH/file45789405b5c/enrichplot_1.11.3.tar.gz’ had non-zero exit status
Is there anything I can do to solve this error?
Thanks! Kai
I was able to install the Bioconductor version of enrichplot when I used R 4.0.4. But the above occurred for both R 4.0.4 and 4.0.5.