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[feature request] Support metabolite enrichment analysis

Open Landau1994 opened this issue 1 year ago • 1 comments

Will ClusterProfiler support metabolite enrichment analysis in the near future?

Landau1994 avatar Feb 20 '24 16:02 Landau1994

Note that I am not an expert on metabolomics. Yet, my thoughts: by using the generic functions enricher and GSEA one could perform over-representations resp. enrichment analysis on any type of data / input. So the analytical framework is already available. The question I have is what exactly is the type of input data you have in mind, and which source to use for predefined metabolite pathways and disease states?

guidohooiveld avatar Feb 23 '24 08:02 guidohooiveld