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difference between GSEA() and gseKEGG()

Open CJSCI666 opened this issue 1 year ago • 2 comments

Hello I am just a beginner, I was reading the clusterProfiler documentation and found a question what is the difference between GSEA() and gseKEGG(), I tried to google but didn't get the answer I wanted, no one seems to have a question about this, but this question really bothers me, please give me an answer, thank you very much!

CJSCI666 avatar Aug 31 '22 01:08 CJSCI666

GSEA() use the user defined annotation and gseKEGG use the online KEGG annotation.

huerqiang avatar Aug 31 '22 04:08 huerqiang

Thank you very much

CJSCI666 avatar Aug 31 '22 15:08 CJSCI666

您的信件我已经收到。 This is an automatic reply, confirming that your e-mail was received.Thank you

CJSCI666 avatar Oct 11 '22 09:10 CJSCI666