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Error when using `dotplot` on `compareClusterResult`

Open raivivek opened this issue 3 years ago • 0 comments

Prerequisites

  • [x] Have you read Feedback and follow the guide?
    • [x] make sure your are using the latest release version
    • [x] read the documents
    • [x] google your quesion/issue

Describe you issue

I generated results using compareCluster method, which I am trying to use with dotplot. However, I get the following error:

> simplify_cp <- clusterProfiler::simplify(
  cp_compareCluster,
  cutoff = 0.7,
  by = "p.adjust",
  select_fun = min,
  measure = "Wang"
)

> clusterProfiler::dotplot(simplify_cp)

Error in continuous_scale(aesthetics, "viridis_c", gradient_n_pal(viridis_pal(alpha,  : 
  unused arguments (low = "red", high = "blue")

I'm using the latest master for both clusterProfiler and enrichPlot.

Addendum

Editing scale_color_continuous(low="red", high="blue", in dotplot.compareCluster to remove the arguments fixes the issue for me.

raivivek avatar Mar 17 '21 17:03 raivivek