ChIPseeker
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When using enrichPeakOverlap, why the p values of different target peaks are same?
Thank you for developing the wonderful tool. I'm having a problem with the enrichPeakOverlap function. I found that the p-value is the same for different target peaks.
The following code I used:
E7min.res <- enrichPeakOverlap(queryPeak = E7min, targetPeak = peak.list, nShuffle = 10000, mc.cores = 24, TxDb = txdb)
The output is: