ChIPseeker输出注释文件 染色体对不上号

[xiangrong7]

Prerequisites

• [ ] Have you read Feedback and follow the guide?
  • [ ] make sure your are using the latest release version
  • [ ] read the documents
  • [x] google your quesion/issue

Describe you issue

I use my GFF file makeTxDbFromGFF. It's OK. Then

peak.anno = annotatePeak(
    peak =C1.bed,
    tssRegion = c(-3000, 3000),
    TxDb = hsTxDb,
    addFlankGeneInfo = TRUE, 
    flankDistance = 5000,
    verbose = FALSE
  )

It'ok. Then df = data.frame(peak.anno,stringsAsFactors = F) geneChr col is wrong. I don't know why.

[haibol2016]

I found the same error. Could the developer give some comment? Thanks, Dr. Yu.