iterative-Random-Forest
iterative-Random-Forest copied to clipboard
Test error: __init__() got an unexpected keyword argument 'presort'
Running package tests results in the following error (python version 3.6.12, sklearn 0.24.1, numpy 1.17.5, scipy 1.4.1, cython 0.29.22, pydotplus 2.0.2, matplotlib 3.0.3, jupyter 1.0.0, pyyaml 5.4.1):
ekravtchenko@server:~/iterative-Random-Forest$ python irf/tests/test_irf_utils.py
Traceback (most recent call last):
File "irf/tests/test_irf_utils.py", line 14, in <module>
sklearn_ds=breast_cancer, n_estimators=10)
File "/home/ekravtchenko/iterative-Random-Forest/irf/irf_jupyter_utils.py", line 110, in generate_rf_example
rf.fit(X=X_train, y=y_train)
File "/home/ekravtchenko/iterative-Random-Forest/irf/ensemble/wrf.py", line 20, in fit
self.base_estimator = WeightedDecisionTreeClassifier()
File "/home/ekravtchenko/iterative-Random-Forest/irf/tree/tree.py", line 401, in __init__
ccp_alpha=ccp_alpha)
File "/home/ekravtchenko/.conda/envs/new_frgpy/lib/python3.6/site-packages/sklearn/utils/validation.py", line 63, in inner_f
return f(*args, **kwargs)
TypeError: __init__() got an unexpected keyword argument 'presort'
ekravtchenko@server:~/iterative-Random-Forest$ python irf/tests/test_irf_weighted.py
Traceback (most recent call last):
File "irf/tests/test_irf_weighted.py", line 70, in <module>
test_iRF_weight1()
File "irf/tests/test_irf_weighted.py", line 34, in test_iRF_weight1
n_estimators_bootstrap=5)
File "/home/ekravtchenko/iterative-Random-Forest/irf/irf_utils.py", line 589, in run_iRF
X_test = X_test, y_test = y_test)
File "/home/ekravtchenko/iterative-Random-Forest/irf/ensemble/wrf.py", line 65, in fit
feature_weight=feature_importances)
File "/home/ekravtchenko/iterative-Random-Forest/irf/ensemble/wrf.py", line 20, in fit
self.base_estimator = WeightedDecisionTreeClassifier()
File "/home/ekravtchenko/iterative-Random-Forest/irf/tree/tree.py", line 401, in __init__
ccp_alpha=ccp_alpha)
File "/home/ekravtchenko/.conda/envs/new_frgpy/lib/python3.6/site-packages/sklearn/utils/validation.py", line 63, in inner_f
return f(*args, **kwargs)
TypeError: __init__() got an unexpected keyword argument 'presort'
I believe that's because the presort parameter has been deprecated and removed from the 0.24 scikit-learn
Thanks! It does indeed work if I install a previous version of scikit-learn.