B-SOID

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Cannot pre-proccess data for the first time [FileNotFoundError]

1

Hi, I have just started using B-SOiD and I'm super excited about this. Unfortunatelly, I have problems right from the start. After I follow the great instructions and gifs on...

Temp2Spec

Generate videos snippets for interpretation: nothing happens

2

Hi, I'm trying to classify mouse behaviors using DLC pose estimations. It went fine all the way to the generation of gifs. The app displays "Creating gifs from mp4s..." and...

slolignier

Labeling Group Numbers

1

When the action groups are obtained and come out as numerical values from the "Identify and tweak clusters" step (for example, let's say I got 30 different possible groups), how...

mitras1210

BSOID group number not shown

1

I have just started using BSOID for mice behavioural studies and I have run some of my videos and generated a side by side of my video and the cluster...

NicoleStrathclyde

UMAP cluster coordinates as ouput

3

Hello! I was wondering if there was a way the output csv files could be modified to include the coordinates where the cluster would map onto the umap (for example,...

ellaksay

IndexError: index 1 is out of bounds for axis 0 with size 1

1

IndexError: index 1 is out of bounds for axis 0 with size 1 Traceback: File "e:\conda\envs\bsoid_v2\lib\site-packages\streamlit\script_runner.py", line 332, in _run_script exec(code, module.__dict__) File "E:\Aniaml Study\B-SOID-master\B-SOID-master\bsoid_app.py", line 42, in processor.compile_data() File...

Zch6666

Hi! I'm running b-soid on my DLC outputs. I followed the instructions through every step. But when trying to extract features, I encountered this error, could you help me figure...

runqiL

Running this on a linux environment I have been experiencing a number of issues with some of the requirements, going through a number of package version tweaks, most of all...

Hierakonpolis

Bumps [scipy](https://github.com/scipy/scipy) from 1.5.2 to 1.10.0. Release notes Sourced from scipy's releases. SciPy 1.10.0 Release Notes SciPy 1.10.0 is the culmination of 6 months of hard work. It contains many...

dependabot[bot]

"ValueError: window must be non-negative" raised during Extract and Embed features part

1

Hi, I'm new on B-SOID and I ran across the following error message while trying to extract and embed features : ``` ValueError: window must be non-negative Traceback: File "c:\users\x\anaconda3\envs\bsoid_v2\lib\site-packages\streamlit\script_runner.py",...

frr665