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slicestable.tsv,genes_new.txt,barcode_level_layer_map.tsv

Open yxmsir opened this issue 1 year ago • 2 comments

Dear professor: The work here is highly valuable. I want to replicate the workflow according to the examples, but I can't find several important files. They are "./data/molecular-atlas-master/data/slicestable.tsv" in Example 1, "./genes_new.txt" in Example 2, and "./data/spatialLIBD/barcode_level_layer_map.tsv" in Example 4. Could you tell me where I can download them?

yxmsir avatar Jul 16 '24 07:07 yxmsir

Hi,

you can get the files following the instruction: https://github.com/YangLabHKUST/STitch3D/issues/1 https://github.com/YangLabHKUST/STitch3D/issues/5 https://github.com/YangLabHKUST/STitch3D/issues/23#issuecomment-1987879480

gefeiwang avatar Jul 18 '24 14:07 gefeiwang

Thank you very much for your assistance.

yxmsir avatar Jul 20 '24 04:07 yxmsir