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Application scenarios of Portal

Open coding-runoob opened this issue 2 years ago • 1 comments

Portal has good performance in integration speed and accuracy. I want to use this tool to perform some downstream tasks, but I have some questions about whether Portal can be applied to more than two data sets of integration scenarios. I would appreciate it if you could tell me how to apply Portal to those scenarios with more than two data sets to be integrated.

coding-runoob avatar Feb 18 '23 09:02 coding-runoob

Portal integrates multiple datasets in an incremental manner. It transfers all other datasets into the domain constructed by the first dataset. Codes for this function of Portal are: lowdim_list = portal.utils.preprocess_datasets(adata_list) integrated_data = portal.utils.integrate_datasets(lowdim_list)

See this link in the README file. Thank you for using our Portal package!

jiazhao97 avatar Feb 18 '23 14:02 jiazhao97