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Published 20 hours ago • verified publisher icon YangLab

Export backspliced junctions as separate bam file.

Open kopardev opened this issue 3 years ago • 0 comments

I parse my STAR chimeric junction file to detect circRNAs using CIRCExplorer2. It generates a backspliced_junctions.bed file. How do I get the readids supporting the backspliced junctions so that I can filter my input bam to get only those reads?

kopardev avatar Dec 17 '20 16:12 kopardev