WrightonLabCSU
downloading the databases
Hi,
I want to run DRAMv2 on our HPC, but I'm having trouble downloading data through globus. Since my institute is not in the list, I signed up with my github account, but I can only download data one file at a time. I don't have a desktop machine that will be able the handle the large downloads.
is there an option to directly download the whole dataset as a TAR file to our HPC, where we have plenty of space?
Just following up on this as another user with challenges in using Globus on our HPC set up as well. Any thoughts to a mirror or a wget compatible URL for the database?
The transfer rate for Globus also seems to be excessively slow from the current host (250 kb/s), so it will take about 3 weeks to download at this rate.
Also following up on that - have you found a solution? @vdejager @MicroSeq
Hello, the easiest way to download the whole folder from Globus is probably using globus connect personal (https://docs.globus.org/globus-connect-personal/install/), which allows your laptop, server, etc. to become a globus endpoint. So you can transfer whole folders at once. And it should be faster I believe this way.
