DRAM
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WrightonLabCSU
KeyError: 'amg_database' in DRAM-v
I was running DRAM-v to annotate some VirSorter2 results before distillation, but in the error file I got this:
/mnt/home/soft/dramv/programs/x86_64/1.4.6/lib/python3.9/site-packages/mag_annotator/database_handler.py:123: UserWarning: Database does not exist at path None warnings.warn("Database does not exist at path %s" % description_loc) /mnt/home/soft/dramv/programs/x86_64/1.4.6/lib/python3.9/site-packages/mag_annotator/database_handler.py:537: UserWarning: Sequences will not be annoated against VOGDB as it is not configured for use in DRAM warnings.warn( 2023-07-27 11:36:12,402 - 1 fastas found 2023-07-27 11:36:12,403 - Checking for duplicate names 2023-07-27 11:36:12,623 - No duplicate names found 2023-07-27 11:36:12,624 - Starting the Viral Annotation of Genes with database configuration:
2023-07-27 11:36:12,627 - Retrieved database locations and descriptions
2023-07-27 11:36:12,627 - Annotating final-viral-combined-for-dramv
2023-07-27 11:48:20,796 - Turning genes from prodigal to mmseqs2 db
2023-07-27 11:48:25,234 - No KEGG source provided so distillation will be of limited use.
2023-07-27 11:48:33,287 - Merging ORF annotations
2023-07-27 16:02:27,738 - Annotations complete, processing annotations
Traceback (most recent call last):
File "/mnt/home/soft/dramv/programs/x86_64/1.4.6/bin/DRAM-v.py", line 161, in
