Will Foran

Thank you for sharing this package! As mentioned elsewhere in the repo issues, it brought me back to emailing with emacs. I wanted to make style changes similar to #116...

[Bug]: linux `uv add psychopy`: "ERROR: Requires macOS to install or build" (pyobjc)

4

### PsychoPy Version v2024.2.5, HEAD ### What OS are your PsychoPy running on? Linux-based systems ### Bug Description on linux, `uv add psychopy` fails to build b/c of an objc...

spm_bids/parse_filename:orderfields try/catch causes indexing error for dwi?

1

I think there's a bug [using `orderfields` without all fields specified](https://github.com/spm/spm/blob/main/spm_BIDS.m#L734). Fields `{'sub','ses','acq','run', 'bval','bvec'}` and `'filename','ext','type'` are specified but no `dir` as in `sub-11751_ses-1_dir-AP_dwi.nii.gz` Trying the following in python ```...

first pass at #57 explicitly required `numpy>1.23.2`. Also allowed all other requirements to be >= their current versions. To get tests to pass, I updated the call to pydicom's save_as...

Trying ``` uv tool run nii2dcm ``` Fails b/c numpy 1.23.2 ([Aug 13, 2022](https://pypi.org/project/numpy/1.23.2/)) depends on distutils, removed in python 3.12 (released [Oct. 2, 2023](https://www.python.org/downloads/release/python-3120/)) ``` × Failed to build...

32bit IPv6 unpack

6

For #4485 At least two blocking points 1. not sure where or how to put in tests: `_test/tests/inc/Ip.test.php` is intimidating :) 2. `ipv6_upper_lower_32` probably doesn't match `unpack('Jupper/Jlower', inet_pton($ip))`. I thought...

after upgrade: red box "ValueError: 64-bit format codes are not available for 32-bit PHP"

4

### The problem I migrated an old hogfather php5 site to php8 (working save css 500 error) and then updated dokuwiki to current stable. After update, `doku.php` shows only a...

CLI 'pixel' command

3

Minimal implementation of a `clean-pixels` command option for the CLI (#284). * [deid/dicom/pixels/clean.py:_get_clean_name](https://github.com/pydicom/deid/pull/285/files#diff-01559f95064ff2dac0358b74c933704bd1dd024b1a74b4e8eb84ebc41a1adade): refactor to allow no `clean-` prefix and no extension change for predicable dicom_save (new directory only, not...

CLI does not run `clean_pixel_data` / `DicomCleaner`?

3

running ``` deid --debug --overwrite -o /tmp/phi-clean identifiers -a all --deid ./deid-py.cfg --input phi.dcm ``` with `deid-py.cfg` like ``` FORMAT dicom %filter greylist LABEL Censor Top Left contains SOPInstanceUID ....