WebVOWL icon indicating copy to clipboard operation
WebVOWL copied to clipboard

Large JSON files

Open mbenezra opened this issue 6 years ago • 6 comments

Is there a limit to the size of the JSON file that can be uploaded to WebVOWL? I tried uploading a file of 160MB, is that too large?

mbenezra avatar Jun 25 '19 16:06 mbenezra

is this a 160MB ontology? web UI suggests a max of 5MB for uploads

christopheralcock avatar Jun 25 '19 17:06 christopheralcock

Yes. I used OWL2VOWL to produce the JSON file from an OWL file produced by https://github.com/IHTSDO/snomed-owl-toolkit from the SNOMED CT RF2 file format.

mbenezra avatar Jun 25 '19 17:06 mbenezra

SNOMED CT has approximately 350,000 terms.

mbenezra avatar Jun 25 '19 17:06 mbenezra

Yes, there is a limit to the file size but only in the public version of WebVOWL (owl2vowl)

Since you already have the JSON file, you can use a local instance of WebVOWL that does not have this file size restriction (http://downloads.visualdataweb.de/webvowl_1.1.4.zip)

However, due to the size and number of elements you might have some performance problems.

Kind Regards, Vitalis

vitalis-wiens avatar Jun 27 '19 10:06 vitalis-wiens

I have a 135kb file, that has the following stats. The file loads but the UI is extremely slow to process at Scale level "0" when data type and object properties are both shown. Is there a workaround to speed things up?

Classes: 320 Object prop.: 420 Datatype prop.: 2257 Individuals: 0 Nodes: 2577 Edges: 2793

The reference json is available here: https://odataontology.azurewebsites.net/data/msgraph10.json @vitalis-wiens , it seems like the redraw and animate take a quite a lot of time to complete. Is there any way to mitigate?

madansr7 avatar Jul 30 '19 22:07 madansr7

any thoughts or updates?

madansr7 avatar Sep 17 '19 21:09 madansr7