Shujie Fan

Results 13 comments of Shujie Fan

MD_relaxed and MD_NPT now support `maxwarn` innput. Current EM cannot support `maxwarn` as the EM function in `gromacswrapper` doesn't have this input.

This problem is mainly due to in the script we don't have any input for temperature (see [here](https://github.com/Becksteinlab/MDPOW/blob/3971e5d3c90e2d9e440429b4bcce4513f1c037f8/scripts/mdpow-solvationenergy#L29)2). And the scripts which are used to calculate solvation free energies don't...

@iorga The solvent_name is the molecule type defined in the itp file. Althought it's `SOL` in `[ moleculetype ]` but gromacs still uses the atomtype in `[ atom ]` which...