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Scripts to automate package builds on RC Platforms

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Application: ImageMagick Link: https://imagemagick.org/script/download.php Cluster: Myriad Description: A dependency for [GSVA](https://github.com/rcastelo/GSVA) and [imcRtools](https://github.com/BodenmillerGroup/imcRtools) License: https://imagemagick.org/script/license.php

App install
Done?
Myriad

IN:06165073 > Recently on the Quantum Espresso mailing list a group posted impressive performance with the GPU version of the software. > > They used the exact same GPUs that...

App install
Done?
Myriad
Young

The current version of CRYSTAL on the clusters is CRYSTAL17 and it is installed as a reserved application (users need to be in the _legcryst_ group). CRYSTAL23 is the latest...

App install
License Issue

Application: Tinker-HP Link: https://tinker-hp.org/ Cluster: Young Description: parallel molecular dynamics simulations on CPU/GPU using classical or machine-learning force fields License: open source, bespoke academic non-commercial licence on GitHub site Many...

App install
Young

Application: Schrödinger Maestro Link: Cluster: Michael/Myriad/Kathleen Description: Maestro is a suite of tools for doing molecular docking. It has a GUI (which uses QT) but can submit jobs into a...

App install

an Open System for Earthquake Engineering Simulation (OpenSees) : https://opensees.github.io/OpenSeesDocumentation/index.html OpenSeesPy : https://github.com/zhuminjie/OpenSeesPy/tree/openseespy Docs: https://openseespydoc.readthedocs.io/en/latest/index.html

App install
Myriad

Application: ANSYS 2023.R1 and R2 Cluster: Myriad & Kathleen at least Description: does fluid dynamics and other macroscopic physics simulations License: proprietary Ticket number: IN:00000000 ANSYS 2023.R1 is installed, but...

App install

The update to the LM has been requested to support Gruobi 11.0 on the EEE Cluster but it makes sense to install the latest version on Myriad as well.

App install
Done?
License Issue
Myriad

IN:06281531 and also IN06416834 Request for ABAQUS 2023. Have asked Mech Eng if they have installers for that version.

App install
Blocked
Myriad

Update requested for use with Econ Myriad RStudio: Spark 3.5 and Hadoop 3.

App install
Myriad