tiatoolbox
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NEW: Add SCCNN Cell Detection Architecture
- Add SCCNN architecture.
Codecov Report
Merging #434 (3ef7ab3) into develop (1ba4272) will increase coverage by
0.02%
. The diff coverage is100.00%
.
@@ Coverage Diff @@
## develop #434 +/- ##
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+ Coverage 98.59% 98.62% +0.02%
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Files 58 59 +1
Lines 5784 5872 +88
Branches 1047 1049 +2
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+ Hits 5703 5791 +88
Misses 69 69
Partials 12 12
Impacted Files | Coverage Δ | |
---|---|---|
tiatoolbox/models/architecture/micronet.py | 100.00% <ø> (ø) |
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tiatoolbox/models/architecture/sccnn.py | 100.00% <100.00%> (ø) |
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tiatoolbox/models/architecture/unet.py | 100.00% <100.00%> (ø) |
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@vqdang @mostafajahanifar @John-P this is ready for review. I have added model trained on CoNiC as well.
Looks good. I like Dang's suggestion of moving the spatially constrained layer into its own class (easier to re-use), but otherwise good. Happy either way.
I had discussed this with Dang earlier. This meant retraining the model separately. So we decided not to do this.