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NEW: Feature Engine for Multi-Task Segmenter

Open adamshephard opened this issue 2 years ago • 2 comments

Add engine for the multi-task segmentor to allow simultaneous instance segmentation of nuclei and the semantic segmentation of regions. This replaces commit #216 due to history error in old PR.

TODO

  • [ ] Update unit testing
  • [x] Add argument to store instance segmentation outputs as .dat files and semantic segmentation outputs as .npy
  • [x] Update Notebook

adamshephard avatar Jul 22 '22 12:07 adamshephard

Codecov Report

Merging #424 (05da38e) into develop (149324a) will increase coverage by 0.00%. The diff coverage is 100.00%.

@@            Coverage Diff            @@
##           develop     #424    +/-   ##
=========================================
  Coverage    99.74%   99.74%            
=========================================
  Files           62       63     +1     
  Lines         6616     6744   +128     
  Branches      1073     1107    +34     
=========================================
+ Hits          6599     6727   +128     
  Misses           8        8            
  Partials         9        9            
Impacted Files Coverage Δ
tiatoolbox/models/__init__.py 100.00% <100.00%> (ø)
tiatoolbox/models/engine/multi_task_segmentor.py 100.00% <100.00%> (ø)
...oolbox/models/engine/nucleus_instance_segmentor.py 98.48% <100.00%> (+0.01%) :arrow_up:
tiatoolbox/models/engine/semantic_segmentor.py 100.00% <100.00%> (ø)

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codecov[bot] avatar Jul 22 '22 12:07 codecov[bot]

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