tiatoolbox
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NEW: Feature Engine for Multi-Task Segmenter
Add engine for the multi-task segmentor to allow simultaneous instance segmentation of nuclei and the semantic segmentation of regions. This replaces commit #216 due to history error in old PR.
TODO
- [ ] Update unit testing
- [x] Add argument to store instance segmentation outputs as .dat files and semantic segmentation outputs as .npy
- [x] Update Notebook
Codecov Report
Merging #424 (05da38e) into develop (149324a) will increase coverage by
0.00%
. The diff coverage is100.00%
.
@@ Coverage Diff @@
## develop #424 +/- ##
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Coverage 99.74% 99.74%
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Files 62 63 +1
Lines 6616 6744 +128
Branches 1073 1107 +34
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+ Hits 6599 6727 +128
Misses 8 8
Partials 9 9
Impacted Files | Coverage Δ | |
---|---|---|
tiatoolbox/models/__init__.py | 100.00% <100.00%> (ø) |
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tiatoolbox/models/engine/multi_task_segmentor.py | 100.00% <100.00%> (ø) |
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...oolbox/models/engine/nucleus_instance_segmentor.py | 98.48% <100.00%> (+0.01%) |
:arrow_up: |
tiatoolbox/models/engine/semantic_segmentor.py | 100.00% <100.00%> (ø) |
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