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Published 20 hours ago • verified publisher icon TimoLassmann

number of threads

Open ardy20 opened this issue 2 years ago • 1 comments

Hi How many cpus it use? How can we increase number of threads or CPU when using clusters?

ardy20 avatar Oct 13 '21 11:10 ardy20

https://github.com/TimoLassmann/kalign/blob/d494b4ce715cf0907db1bc57d0d5ddaf6f382b10/src/run_kalign.c#L208

so use "-n number".

xizhihui avatar Apr 08 '22 02:04 xizhihui

In version 3.3.4 this can be set using the -nthreads option.

TimoLassmann avatar Oct 28 '22 05:10 TimoLassmann