Thomas Hickman issues

Results 14 issues of


                                            Thomas Hickman

Inputs containing both directories and files within directories fail to get mounted to correct places for CWL >= 1.1 workflows

If you pass in a directory and a file contained within this directory to a CWL tool using cwl>=1.1, the file contained within this directory does not get put into...

Add a LICENSE file

Hi, just a note that there's no LICENSE file in this repository that I can find - it would be great if this was released under an open source licence!

Add main entrypoint to package.json

At the moment, if you execute `require("mprogress")` in node, the error `Error: Cannot find module 'mprogress'` is produced. Adding a main entry in package.json will fix this

CWL workflow complied to include a subworkflow with an `outputs` applet fails to run successfully

If you have a workflow as follows: ``` cwlVersion: v1.2 class: Workflow inputs: [] requirements: SubworkflowFeatureRequirement: {} steps: - id: one in: [] out: [output] run: one.cwl - id: two...