Requirements File?

[staniPetrox]

Hey,

I can see that you provide a docker image, but is there a possibility that you provide a requirements file?

Best regards, Benedikt

[Thanos-DB]

Hi @staniPetrox

you can use https://gla-my.sharepoint.com/:f:/g/personal/a_tragakis_1_research_gla_ac_uk/EpyRwXVsbXxEmTaEjl-OuFYBQBuNkz9TfRP3DFR5WUf0jg?e=abEu7d

BR Thanos

[staniPetrox]

Hey Thanos,

this doesn't work. You need to be a Glasgow faculty member to log in as I understand? Can we do this in another way?

Thank you and all the best, Benedikt

[Thanos-DB]

Hi @staniPetrox

it should be fixed now but just in case this is the content of the file

tensorflow==2.5.0 keras==2.8.0 matplotlib==3.3.2 medpy==0.4.0 nibabel==3.2.1 opencv-python pandas==1.1.3 pydicom==2.2.2 scikit-image scikit-learn

BR Thanos

[recharladivyareddy]

Hello sir, tensorflow 2.5 version isn't available

and if I use version 2.8 I'm getting this error. Traceback (most recent call last): File "/content/FullyConvolutionalTransformer/TensorFlow/main.py", line 9, in acdc_data, train_afn, train_hdr = get_acdc(acdc_data_train) File "/content/FullyConvolutionalTransformer/TensorFlow/utils.py", line 586, in get_acdc data[0] = np.expand_dims(data[0], axis=3) File "<array_function internals>", line 180, in expand_dims File "/usr/local/lib/python3.10/dist-packages/numpy/lib/shape_base.py", line 597, in expand_dims axis = normalize_axis_tuple(axis, out_ndim) File "/usr/local/lib/python3.10/dist-packages/numpy/core/numeric.py", line 1397, in normalize_axis_tuple axis = tuple([normalize_axis_index(ax, ndim, argname) for ax in axis]) File "/usr/local/lib/python3.10/dist-packages/numpy/core/numeric.py", line 1397, in axis = tuple([normalize_axis_index(ax, ndim, argname) for ax in axis]) numpy.AxisError: axis 3 is out of bounds for array of dimension 2

thank you