MedicalNet

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Classification code with modification of train.py and datasets/brains18.py

17

I'd like to share the code of classification with modification of train.py and datasets/brains18.py The code is based on JasperHG90's commented at #58 To deal with the issue of Classification,...

loopnownow

Utilizing resnet_50.pth for 3D Feature Map Extraction

3

Hi, I want to use resnet_50.pth pre-trained encoder to extract 3D feature maps from medical images. Is the following method correct? It seems strange that the parameters of width, height,...

aeinkoupaei

Missing key(s) in state_dict error when testing the pretrained models

5

Hi, thank you for sharing your excellent work! I wanna test your pre-trained lung segmentation model ([this release](https://github.com/Tencent/MedicalNet#update20190730)) with my CT data, and I encountered the following error when running...

ni-wei

How to get the pretrained model

1

Hi, I am a bit new in the field. I just wanted to ask how can I load the pretrained model. Thanks

marwatrigui

Dataset: https://github.com/rsingla92/kidneyUS/ I want to understand how MedicalNet can detect CKDs in Kidney Ultrasound Scans. Any guidance would be much appreciated.

skwolvie

Bump scipy from 1.1.0 to 1.10.0

1

Bumps [scipy](https://github.com/scipy/scipy) from 1.1.0 to 1.10.0. Release notes Sourced from scipy's releases. SciPy 1.10.0 Release Notes SciPy 1.10.0 is the culmination of 6 months of hard work. It contains many...

dependabot[bot]

cuda error: out of memory

3

could you please tell me how many graphic memories are required? can i use my 6gb memories to run this project

cl886699

Why lr *100 when load pretrained model?

2

Thank you for your work. I wonder why lr*100 and i have found the rate of convergence could get higher with original lr. Thanks a lot. { 'params': parameters['base_parameters'], 'lr':...

Dylanself123

on which datasets the models are pretrained ?

1

hello, I found this 2.Download data & pre-trained models ([Google Drive](https://drive.google.com/file/d/13tnSvXY7oDIEloNFiGTsjUIYfS3g3BfG/view?usp=sharing) or [Tencent Weiyun](https://share.weiyun.com/55sZyIx)) on your site, but maybe I misread it on which dataset these networks are trained. Maybe...

nkoser

Do you add noise on the background of input images in function '__itensity_normalize_one_volume__'?

2

``` def __itensity_normalize_one_volume__(self, volume): pixels = volume[volume > 0] mean = pixels.mean() std = pixels.std() out = (volume - mean)/std out_random = np.random.normal(0, 1, size = volume.shape) out[volume == 0]...

joe1chief