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Published 20 hours ago • verified publisher icon Teichlab

Details to be added about the available model

Open saeedfc opened this issue 2 years ago • 2 comments

Dear,

In the description of the model it is not clear whether the model involves cells from both healthy and CD or just healthy? I am especially referring to 'Cells_Intestinal_Tract ' from intestinal cells from fetal, pediatric and adult human gut (134 cell types). The original study associated also has CD data. Hence the confusion.

Kindly clarify.

saeedfc avatar Sep 19 '22 18:09 saeedfc

@saeedfc, good point! The 'Cells_Intestinal_Tract' indeed contains pediatric CD cells. Will clarify this in the model details.

ChuanXu1 avatar Sep 20 '22 20:09 ChuanXu1

@saeedfc, the model details have been updated.

https://www.celltypist.org/models

https://github.com/Teichlab/celltypist_wiki/blob/main/json/models.json#L56

ChuanXu1 avatar Sep 23 '22 09:09 ChuanXu1

This issue should be solved. Please let me know if you still need more details for the model.

ChuanXu1 avatar Nov 06 '22 15:11 ChuanXu1