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Published 20 hours ago • verified publisher icon Teichlab

Invalid Counts data

Open nobie666 opened this issue 3 years ago • 1 comments

Hello, I have caught a problem when running the statistical method: Invalid Counts data using the reference data--test_counts.txt and test_meta.txt. Could you help me solve the problem? Thank you so much! image

nobie666 avatar Sep 08 '21 11:09 nobie666

Hi @nobie666 thank you for using CellPhoneDB. Looks like you've got the order of the arguments wrong. You need to provide the meta first and then counts second like this:

cellphonedb method statistical_analysis test_meta.txt test_counts.txt

prete avatar Sep 08 '21 11:09 prete