signal (7): Bus error on 5000+ genes

[jlaw9]

When running PIDC on a large dataset of 5000+ genes, I'm getting a signal (7): Bus error from Linux similar to the one reported here. Do you know if there's a way around this issue?

I'm running Julia v1.1 on Ubuntu 18.04.

[Tchanders]

Hi @jlaw9 - thanks for the feedback.

From the comment on the other task it looks as though your /dev/shm limit may be the problem. Inferring the network using PIDC creates a large shared array, which may be too large for your current limit. This article has information on checking and increasing the limit.

Let me know how you get on - we could add this to the README if it works.

[ForrestLin0805]

it works after resize the dev/shm