SIRF-Exercises
SIRF-Exercises copied to clipboard
git status again problematic
After installing latest nbstripout (0.7.1):
sirfuser@vagrant:~/devel/SIRF-Exercises$ git checkout master
sirfuser@vagrant:~/devel/SIRF-Exercises$ git fetch origin
sirfuser@vagrant:~/devel/SIRF-Exercises$ git reset --hard origin/master
HEAD is now at 33fae8f replace MR data used for intro/synergistic notebooks (#214)
sirfuser@vagrant:~/devel/SIRF-Exercises$ git pull
Already up to date.
sirfuser@vagrant:~/devel/SIRF-Exercises$ git status
Refresh index: 100% (97/97), done.
On branch master
Your branch is up to date with 'origin/master'.
Changes not staged for commit:
(use "git add <file>..." to update what will be committed)
(use "git restore <file>..." to discard changes in working directory)
modified: notebooks/Geometry/a_geometry.ipynb
modified: notebooks/Geometry/b_geom_resamp.ipynb
modified: notebooks/Geometry/c_fully3dgeom.ipynb
modified: notebooks/Geometry/d_manipulation.ipynb
modified: notebooks/Geometry/get_nifti_data.ipynb
modified: notebooks/MR/e_advanced_recon.ipynb
modified: notebooks/MR/f_create_undersampled_kspace.ipynb
modified: notebooks/PET/reconstruct_measured_data.ipynb
modified: notebooks/SPECT/SPECT_OSEM_measured_data.ipynb
modified: notebooks/SPECT/SPECT_OSEM_measured_data_solution.ipynb
modified: notebooks/SPECT/SPECT_acquisition_model.ipynb
no changes added to commit (use "git add" and/or "git commit -a")
sirfuser@vagrant:~/devel/SIRF-Exercises$ git diff
sirfuser@vagrant:~/devel/SIRF-Exercises$
sirfuser@vagrant:~/devel/SIRF-Exercises$ nbstripout --uninstall
sirfuser@vagrant:~/devel/SIRF-Exercises$ git status
On branch master
Your branch is up to date with 'origin/master'.
nothing to commit, working tree clean
I despair a bit...
@casperdcl Should we just drop the nbstripout --install?
what's the git diff of the allegedly modified notebooks?
Seems to be only id, e.g.
index 0ec217e..464cd1d 100644
--- a/notebooks/Geometry/a_geometry.ipynb
+++ b/notebooks/Geometry/a_geometry.ipynb
@@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "markdown",
- "id": "94bdaed3",
+ "id": "0",
"metadata": {},
"source": [
"# Geometry in SIRF"
@ -10,7 +10,7 @@
},
{
"cell_type": "markdown",
- "id": "da4eab04",
+ "id": "1",
"metadata": {},
"source": [
"Authors: David Atkinson\n",
I have the latest (nbstripout==0.7.1) and I don't have any complaints from git status.
Maybe an older version was installed?
nbstripout --uninstall
nbstripout --install
git status