Steven M. Van Belleghem

Hi Paolo, I am travelling right now, so it will take me a few days before I'll get to this. In the mean time, could you share me a folder...

Hi Ginbay, The easiest solution is to always use the same target image (my guess is those are different now between the K1 and K2 analysis. If that’s not an...

Hi, Please do share me the google drive link. Thanks, Steven From: C-G-L ***@***.***> Sent: Saturday, October 1, 2022 2:01 AM To: StevenVB12/patternize ***@***.***> Cc: Steven M. Van Belleghem ***@***.***>;...

Hi Ginbay, For comparable analysis and PCA, I think it is really important to use the same target for all images. Otherwise your group differences will be driven by differences...

Hi Dylan, I pushed a fix of plotHeat and the example code to github. There was something off in the code (keeping track of the extent of the raster and...

Is using landmarks an option? It’s more manual work, but might work better in this case. Steven From: ***@***.***> Sent: Tuesday, August 31, 2021 9:39 AM To: ***@***.***> Cc: Steven...

Hi Christopher, Could you try adding the refimage also to the pca plot command like for the plotHeat? Steven -------- Original message -------- From: C-G-L ***@***.***> Date: 10/14/22 4:58 AM...

Does the totallist include all the samples aligned to the same target? Also make sure anything else matches the plotHeat command if it’s possible. Steven From: C-G-L ***@***.***> Sent: Friday,...

Hi hintzam33, this sounds like the path to the image files isn't found. Have you set the working directory correctly? The program will use the 'prepath' starting from the working...

Hi Lucie, I don’t think the cropOffset will work with negative values. Using patLanRGB, I would advise you to not use the crop, but instead at the end of your...