StephDcTUM

Okay, I changed the the fmriprep version in the Dockerfile here https://github.com/edickie/ciftify/blob/421f87d59bd08775e846847fceb8e8430ea81bc8/ciftify/bidsapp/Dockerfile to `FROM nipreps/fmriprep:20.2.1` Now it works. The following line is executed in python over my dockercontainter: `subprocess.run(['ciftify_recon_all', '--verbose',...