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[Request An Update]: Canu 2.3

Open MrTomRod opened this issue 7 months ago • 1 comments

What container needs an update?

Thanks for your great work.

Please update Canu 2.3 (Dec 17, 2024): https://github.com/marbl/canu/releases/tag/v2.3

MrTomRod avatar May 22 '25 12:05 MrTomRod

Hi @MrTomRod , we have a draft PR for Canu 2.3, but ran into issues along the way so we likely won't add v2.3 to our repository: https://github.com/StaPH-B/docker-builds/pull/1171

We're planning on waiting to update the dockerfile & docker image until the devs release another version, as they mentioned making a patch release to fix the java issues that we and others were running into with v2.3

kapsakcj avatar May 22 '25 15:05 kapsakcj

Thanks to @Kincekara , the java issue with canu 2.3 should be resolved when using the StaPH-B docker image. We just deployed the docker image to dockerhub and quay

Please let us know if you run into any issues using this new version

  • https://hub.docker.com/r/staphb/canu/tags
  • https://quay.io/repository/staphb/canu?tab=tags

kapsakcj avatar Jul 18 '25 02:07 kapsakcj