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A Python library to load and analyze the MIMIC III Critical Care Database

MIMIC3py

A Python library to load and analyze the MIMIC III Critical Care Database

"MIMIC-III (Medical Information Mart for Intensive Care III) is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012." It includes demographics, vital signs, laboratory tests, medications, clinical notes, and more.

More details are availible at:

  • https://mimic.physionet.org/about/mimic/
  • http://www.nature.com/articles/sdata201635

This repository contains Python 3 code that will help you:

  • Download the data.
  • Load the data into Pandas data frames.

The package is hosted on pypi at: https://pypi.python.org/pypi/MIMIC3py/0.11

You can install it using pip install MIMIC3py