Vikesh Ajith

Deleting layer freezes application (desktop and online)

2

### Preflight Checklist * [x] I agree to follow the [Code of Conduct](https://github.com/jgraph/drawio-desktop/blob/master/CODE_OF_CONDUCT.md) that this project adheres to. * [x] I have searched the issue tracker for a feature request...

Better error message for empty fastq files

2

### Description of feature I noticed that sometimes if an empty fastq is provided, it returns a slightly cryptic error message: ``` ERROR ~ Cannot invoke method startsWith() on null...

I have been running `sesameDataCache()` and it is incredibly slow, taking about 3 hours to download only 1/3 of the cache (700mb). There has to be a manual way of...

Volumes not initially mounting for services that restart on windows reboot

4

### Description I am having the exact same issue as #584 on Docker Desktop 4.28.0 (139021) for Windows. Essentially on computer boot, when the service restarts, the containers cannot find...

mlr --otsv does not handle broken quotes correctly compared to --ocsv

6

version:mlr 6.12.0 I have a TSV file that contains uneven double quotes `"` that often results in downstream tools expecting RFC compliant TSVs dropping rows silently (e.g. R `read_tsv`). This...

### Description of the bug Ran into this controlfreec error trying to run sarek in paired mode: ``` Error in `$

TIDDIT_SV produces `*.tiddit.ploidies.tab` but not `*.tiddit.vcf`, timing out and failing to complete

5

### Description of the bug Spent the last few weeks trying to troubleshoot this bug where tiddit would consistently fail to complete for certain samples and not others. However, within...

Is there a way to include ensembl_ids and/or hgnc_ids along with gene_name?

1

annotSV version `3.4` Hi, Maybe I'm missing something in the docs, but is there a way to include ensembl IDs and/or HGNC IDs along with gene name in annotSVs output?...

Is there a way to rename samplename within .somalier files?

2

Hi, First off, this has been an amazingly useful tool for my work, really appreciate it! So I didn't realise at the time that samplenames are hardcoded at the somalier...

Unlike other `shinyWidget` elements like `materialSwitch`, `actionBttn` does not respect `bslib::bs_theme` color arguments: ```R library(shiny) library(shinyWidgets) library(bslib) ui