MEArec

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A combo of rank based decay and ISI related recovery seems to better explain amplitude modulation in bursts.

sreedhar-kumar

Unexpected behavior on HD-MEA simulation ?

11

Hi, I'm trying to simulate data from in vitro neuronal cultures growing on a CMOS-based HD-MEA, specifically the 3Brain Accura chips. I understand that this might be a bit beyond...

b-grimaud

Grid plots fail on `matplotlib` 3.9.2 with the following trace : ``` --------------------------------------------------------------------------- TypeError Traceback (most recent call last) Cell In[17], line 1 ----> 1 mr.plot_waveforms(recgen, electrode='max', cmap='rainbow') File ~/Documents/GitHub/MEArec/src/MEArec/tools.py:3339,...

b-grimaud

Empty Templates Folder

1

Hello, I have tried to install and use the the MEArec library to create some simulated data, but I have an issue I cannot resolve. I'll explain what I did...

lddavila

Hi, running the notebook with allen models data I've received an error "AttributeError: 'Cell' object has no attribute 'xstart'. Did you mean: 'tstart'? dlopen failed -". Actually xstart and so...

Dalila17To

How to use self defined probe to generate datasets?

1

Hi, I want to reproduce the MEArec datasets published here: https://gitlab.tudelft.nl/sbi_tudelft-public-code/spatial_spike_sorting/-/blob/main/README.md?ref_type=heads They provide the template.yaml, array.yaml and recording.yml. I only have the experience with already defined probe. Can you share...

ZoeChen96