Sebastian Penhouet

Results 93 comments of Sebastian Penhouet

I can't even do yarn install after cloning this repro on Windows. I get an infinite stack trace (doesn't stop throwing errors).

@wyli I did see #178 but I did not recognize it as duplicate in that my suggestion does not do any downsampling, right? Also, could you elaborate on the multiscale...

Here the version with the option to define the labels the edge smoothing is applied to and an optional pre-dilation. The pre-dilation seems to help to preserve smaller shapes (just...

@Jingnan-Jia I just finetuned the parameters for our data (trial and error). What is the issue of "not good results"? Could you share your transform code?

For any future reader looking for a work around: For me the easiest workaround was to rewrite all Dicom files via [dcmodify](https://support.dcmtk.org/docs/dcmodify.html) from DCMTK as Explicit VR Little Endian TS...

This issue could be fixed at different places in dcmstack e.g. `DcmMetaExtension.from_sequence`. For a quick fix for us it was easier to monkey patch `nib.nifti1.Nifti1Image.__init__`: ```python import nibabel as nib...

@moloney Thank you for your reply and the clarification on the maintenance / state of this project. I was not aware of the efforts put into nibabel and that the...

I found this repository: https://github.com/matthew-brett/czi-nibabel (not sure if that is supposed to be public). This looks like a really cool project! Going by this: - Project overview: https://github.com/matthew-brett/czi-nibabel/blob/master/dicom_to_xarray.md - Milestones...

@mcobzarenco My static type checker tells me: ``` import falcon ^^^^^^ Stub file not found for "falcon" ``` and using `falcon.Request` as type annotation does not really help the static...