Cory Simon

Thanks, the `vtkcell` feature looks great! I found in [the source code](https://github.com/3dmol/3Dmol.js/blob/master/3Dmol/volume.js#L330-L336) that 3Dmol.js uses Bohr or Angstrom (the latter is what I assumed) [depending on the sign of the...

The new version works correctly on my machine! Removing the dependency will make it easier to integrate into our package `PorousMaterials.jl`. Thanks a lot, the `html=true` flag is a great...

[Very wicked](https://simonensemble.github.io/sbmof1). Is it possible to set a view vector, such as `view=[1, 0, 0]` to set the view normal to a custom vector? e.g. on my website the slab...

@jgreener64 Great, thanks! I'm getting an error for the last example in the tutorial notebook: ``` UndefVarError: ViewAngle not defined Stacktrace: [1] top-level scope at In[14]:3 ``` The option to...

I don't think the normalization below is correct, anyway. ```julia normalize!(L, α=α, norm=:sym) # Lᵅ = D⁻ᵅ*L*D⁻ᵅ normalize!(L, α=α, norm=:rw) # M =(Dᵅ)⁻¹*Lᵅ ``` see [Wikipedia](https://en.wikipedia.org/wiki/Diffusion_map#Diffusion_process). `normalize!(L, α=α, norm=:sym)` is...

eg on `ManifoldLearning v0.9.0`, I am working with the simple toy swiss roll in 2D, and it cannot even recover that with many different Gaussian kernel bandwidths I'm trying.

another bug I found: `decompose` assumes that `L` is symmetric. but it is not necessarily. this introduces another error. here is my code, which does not assume `L` is symmetric:...

I now see that the current setup of `fit(DiffMap, ...)` would only pass a symmetric matrix. anyway, is a PR welcome with three changes: 1. make sure `L` is a...

here is our implementation of diffusion maps we're using for a project. https://github.com/SimonEnsemble/DiffusionMap.jl

it has been a long time since I've used/thought about IAST, and I'm far from an expert on applying it to the liquid phase, so I cannot answer, sorry!