Dylan Nielson

Results 57 comments of Dylan Nielson

Oh actually, maybe the repo's not dead after all. Here's the git status on the local main that @effigies asked for. [git_status_main.txt](https://github.com/OpenNeuroOrg/openneuro/files/12931355/git_status_main.txt)

Maybe add a reset command. Also, check to see if a mindcontrol instance is running and use a different name, or at least add container name as an option.

Provisionally working mindcontrol container in WIP PR #31. If you're interested in that functionality take a look and leave a comment.

Related to this. If the interactive figure used in the report would support it, some keyboard shortcuts for classifying components and saving those classifications would be fantastic as well. Edit:...

I've got some very quick and dirty code in a notebook that generates group reports and makes a directory full of symlinks to images to go with it, will try...

@mgxd Sorry for the delay and the messiness, but here's my notebook: https://github.com/Shotgunosine/make_fmriprep_group_reports/blob/master/update_fmripep_qc_sheet_cleanish.ipynb

@oesteban No worries, I've ended up getting slammed with work issues so my hackathon participation was pretty limited this year. I hope the move is going ok, it's quite a...

It looks like it's failing in the fit: ``` mdat

Huh, looks like it's lmerTest's fault. (btw, I added some rows to the test data to avoid singular fit warnings: [prepped_mdat.csv](https://github.com/pitakakariki/simr/files/7186459/prepped_mdat.csv)) ``` library("lmerTest") library("lme4") library("simr") mdat

@WillemB2104 I've got some [hacky Rpy2 code](https://github.com/nih-fmrif/nielson_abcd_2018/blob/db72a547fed5f52f5197dac34bb90419dcff2585/swarm_dir/run_abcd_perm_new_draws.py#L17-L325) that adds test parameters that the originally learned parameters are applied to. Be careful with it though, in my experience, ComBat seems to...