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mapping input contig names to output
Given that I get a contig name like RNODE_1_length_2185_cov_1230.39000
, how would I know which contig that is in the original file? I can search the coverage field 1230.39
to find the original contig name NODE_18_length_2240_cov_1230.39_component_1
but I hope there is a better way. Even in the stdout, the contig name is different as EDGE_703_length_2240_cov_1230.39_component_1
.
This output is from plasmid spades. Sorry, I don't know if/when I would have the time to do a head to head comparison, regarding my previous issue #8.