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Linearization of improper (differentiating / inverse) models

Open B-LIE opened this issue 5 months ago • 1 comments

Describe the bug 🐞

Consider the well-known, academic "Four Tank" model. Simulation of the input-output (valve-signal to output levels, case = :io in MRE) works. Likewise, linearization (symbolic and numeric) of the input-output model works (case = :lin_io in MRE). Also simulation of the zero dynamics works (specifying the outputs; case = :zero in MRE).

HOWEVER, both symbolic and numeric linearization fails for the zero dynamics case (case = :lin_zero in MRE).

Expected behavior

Both symbolic and numeric linearization of the zero dynamics case (case = :lin_zero) should work. The eigenvalues of the zero dynamics system matrix should equal the transmission zeros of case = :lin_io.

Minimal Reproducible Example 👇

Here is my case, set up with both symbolic and numeric linearization of the zero dynamics.

# Packages
using ModelingToolkit
using ModelingToolkit: t_nounits as t, D_nounits as Dt
using DifferentialEquations
#
# Input functions
# -- control inputs
@register_symbolic u_u1(t)
@register_symbolic u_u2(t)
#
u_v_1(t) = 3.0
u_v_2(t) = 3.0
#
# -- output references
@register_symbolic u_r1(t)
@register_symbolic u_r2(t)
#
u_r_1(t) = 12.4*0.5
u_r_2(t) = 12.7*0.5
# 
# Model FourTank
@mtkmodel FourTank begin
    # Ref: Johansson, K.H. (2000): "The Quadruple-Tank Process: A Multivariable 
    #               Laboratory Process with an Adjustable Zero", 
    #               IEEE Trans. Ctrl. Tech., Vol. 8, No. 3, May 2000
    # Structure parameters
    @structural_parameters begin
        # :io = standard input-output, :zero = zero dynamics
        # :lin_io = linearizing input-output, :lin_zero = linearizing zero dynamics
        case = :io 
    end
    #
    # Model parameters
    @parameters begin
        # Constant 
        g = 981,            [description = "Acceleration of gravity, cm/s^2"]
        # Parameters
        # -- tank parameters
        A_1 = 28,           [description = "Tank 1, cross-section area, cm^2"]
        A_2 = 32,           [description = "Tank 2, cross-section area, cm^2"]
        A_3 = 28,           [description = "Tank 3, cross-section area, cm^2"]
        A_4 = 32,           [description = "Tank 4, cross-section area, cm^2"]
        a_1 = 0.071,        [description = "Tank 1, cross-section area of outlet hole, cm^2"]
        a_2 = 0.057,        [description = "Tank 2, cross-section area of outlet hole, cm^2"]
        a_3 = 0.071,        [description = "Tank 3, cross-section area of outlet hole, cm^2"]
        a_4 = 0.057,        [description = "Tank 4, cross-section area of outlet hole, cm^2"]
        # -- valve parameters, case of LHP zeros/stable zero dynamics
        γ_1 = 0.70,         [description = "Valve 1 split setting, -"]
        γ_2 = 0.60,         [description = "Valve 2 split setting, -"]
        k_1 = 3.33,         [description = "Valve 1 gain, cm3/V.s"]
        k_2 = 3.35,         [description = "Valve 2 gain, cm3/V.s"]
        # -- sensor parameter
        k_c = 0.5,          [description = "Sensor gain, V/cm"]
    end
    #
    # Model variables, with initial values needed
    @variables begin
        # Variables
        # -- states
        h_1(t)=12.4,        [description = "Tank 1 level, cm"]
        h_2(t)=12.7,        [description = "Tank 2 level, cm"]
        h_3(t)=1.8,         [description = "Tank 3 level, cm"]
        h_4(t)=1.4,         [description = "Tank 4 level, cm"]
        # -- sensor signals
        y_1(t),             [description = "Output 1: level in Tank 1, cm"]
        y_2(t),             [description = "Output 2: level in Tank 2, cm"]
        # -- actuator signals
        v_1(t),             [description = "Valve 1 signal, V"]
        v_2(t),             [description = "Valve 2 signal, V"]
    end
    #
    # Model equations
    @equations begin
        # ODEs
        Dt(h_1) ~ -a_1/A_1*sqrt(2g*h_1) + a_3/A_1*sqrt(2g*h_3) + γ_1*k_1/A_1*v_1
        Dt(h_2) ~ -a_2/A_2*sqrt(2g*h_2) + a_4/A_2*sqrt(2g*h_4) + γ_2*k_2/A_2*v_2
        Dt(h_3) ~ -a_3/A_3*sqrt(2g*h_3) + (1-γ_2)*k_2/A_3*v_2
        Dt(h_4) ~ -a_4/A_4*sqrt(2g*h_4) + (1-γ_1)*k_1/A_4*v_1
        # Outputs
        y_1 ~ k_c*h_1
        y_2 ~ k_c*h_2
        # Inputs
        if case == :io
            v_1 ~ u_v_1(t)
            v_2 ~ u_v_2(t)
        elseif case == :lin_io
            #v_1 ~ u_v_1(t)
            #v_2 ~ u_v_2(t)
        elseif case == :zero
            y_1 ~ u_r_1(t)
            y_2 ~ u_r_2(t)
        elseif case == :lin_zero
            #y_1 ~ u_r_1(t)
            #y_2 ~ u_r_2(t)
        end
    end
end
# 
# Instantiating case for linearizing zero dynamics
@named t4_LZ= FourTank(; case=:lin_zero)
t4_LZ= complete(t4_LZ)
# 
# Symbolic linearization -- gives error
mats,t4z_ = ModelingToolkit.linearize_symbolic(t4_LZ, [t4_LZ.y_1, t4_LZ.y_2], [t4_LZ.h_3, t4_LZ.h_4])
# 
# Numeric linearization -- gives error
mats,t4z_ = ModelingToolkit.linearize(t4_LZ, [t4_LZ.y_1, t4_LZ.y_2], [t4_LZ.h_3, t4_LZ.h_4];
                op=Dict(t4_LZ.y_1 => 6.2, t4_LZ.y_2 => 6.35))

Error & Stacktrace ⚠️ Case of symbolic linearization

BoundsError: attempt to access 1-element Vector{Any} at index [2]

Stacktrace:
 [1] getindex(A::Vector{Any}, i1::Int64)
   @ Base .\essentials.jl:13
 [2] expand_derivatives(O::SymbolicUtils.BasicSymbolic{Real}, simplify::Bool; occurrences::SymbolicUtils.BasicSymbolic{Real}) (repeats 5 times)
   @ Symbolics C:\Users\Bernt_Lie\.julia\packages\Symbolics\6WqId\src\diff.jl:257
 [3] expand_derivatives(O::SymbolicUtils.BasicSymbolic{Real}, simplify::Bool; occurrences::Nothing)
   @ Symbolics C:\Users\Bernt_Lie\.julia\packages\Symbolics\6WqId\src\diff.jl:257
 [4] expand_derivatives(O::SymbolicUtils.BasicSymbolic{Real}, simplify::Bool)
   @ Symbolics C:\Users\Bernt_Lie\.julia\packages\Symbolics\6WqId\src\diff.jl:183
 [5] jacobian(ops::Vector{SymbolicUtils.BasicSymbolic{Real}}, vars::Vector{Num}; simplify::Bool, scalarize::Bool)
   @ Symbolics C:\Users\Bernt_Lie\.julia\packages\Symbolics\6WqId\src\diff.jl:470
 [6] jacobian(ops::Vector{SymbolicUtils.BasicSymbolic{Real}}, vars::Vector{Num})
   @ Symbolics C:\Users\Bernt_Lie\.julia\packages\Symbolics\6WqId\src\diff.jl:465
 [7] linearize_symbolic(sys::ODESystem, inputs::Vector{Num}, outputs::Vector{Num}; simplify::Bool, allow_input_derivatives::Bool, eval_expression::Bool, eval_module::Module, kwargs::@Kwargs{})
   @ ModelingToolkit C:\Users\Bernt_Lie\.julia\packages\ModelingToolkit\UXr3S\src\systems\abstractsystem.jl:2454
 [8] linearize_symbolic(sys::ODESystem, inputs::Vector{Num}, outputs::Vector{Num})
   @ ModelingToolkit C:\Users\Bernt_Lie\.julia\packages\ModelingToolkit\UXr3S\src\systems\abstractsystem.jl:2434
 [9] top-level scope
   @ c:\Users\Bernt_Lie\OneDrive\Documents\researchUSN\Supervisor\PhD\Kushila_Jayamanne\Notebooks\jl_notebook_cell_df34fa98e69747e1a8f8a730347b8e2f_X36sZmlsZQ==.jl:1

Case of (numeric) linearization:

{
	"name": "ArgumentError",
	"message": "ArgumentError: Cannot convert Sym to Float64 since Sym is symbolic and Float64 is concrete. Use `substitute` to replace the symbolic unwraps.",
	"stack": "ArgumentError: Cannot convert Sym to Float64 since Sym is symbolic and Float64 is concrete. Use `substitute` to replace the symbolic unwraps.\n\nStacktrace:\n  [1] Float64(x::SymbolicUtils.BasicSymbolic{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}})\n    @ Symbolics C:\\Users\\Bernt_Lie\\.julia\\packages\\Symbolics\\6WqId\\src\\Symbolics.jl:171\n  [2] convert\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\ForwardDiff\\PcZ48\\src\\dual.jl:435 [inlined]\n  [3] setindex!(A::Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}, x::SymbolicUtils.BasicSymbolic{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}, i1::Int64)\n    @ Base .\\array.jl:1021\n  [4] macro expansion\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\SymbolicUtils\\5UmB7\\src\\code.jl:430 [inlined]\n  [5] macro expansion\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\Symbolics\\6WqId\\src\\build_function.jl:546 [inlined]\n  [6] macro expansion\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\SymbolicUtils\\5UmB7\\src\\code.jl:387 [inlined]\n  [7] macro expansion\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\RuntimeGeneratedFunctions\\M9ZX8\\src\\RuntimeGeneratedFunctions.jl:163 [inlined]\n  [8] macro expansion\n    @ .\\none:0 [inlined]\n  [9] generated_callfunc\n    @ .\\none:0 [inlined]\n [10] (::RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing})(::Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}, ::Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}, ::Vector{Float64}, ::Float64)\n    @ RuntimeGeneratedFunctions C:\\Users\\Bernt_Lie\\.julia\\packages\\RuntimeGeneratedFunctions\\M9ZX8\\src\\RuntimeGeneratedFunctions.jl:150\n [11] f\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\ModelingToolkit\\UXr3S\\src\\systems\\diffeqs\\abstractodesystem.jl:351 [inlined]\n [12] ODEFunction\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\SciMLBase\\j8jQg\\src\\scimlfunctions.jl:2335 [inlined]\n [13] UJacobianWrapper\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\SciMLBase\\j8jQg\\src\\function_wrappers.jl:34 [inlined]\n [14] vector_mode_dual_eval!\n    @ C:\\Users\\Bernt_Lie\\.julia\\packages\\ForwardDiff\\PcZ48\\src\\apiutils.jl:24 [inlined]\n [15] vector_mode_jacobian(f::SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, x::Vector{Float64}, cfg::ForwardDiff.JacobianConfig{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2, Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}})\n    @ ForwardDiff C:\\Users\\Bernt_Lie\\.julia\\packages\\ForwardDiff\\PcZ48\\src\\jacobian.jl:125\n [16] jacobian(f::Function, x::Vector{Float64}, cfg::ForwardDiff.JacobianConfig{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2, Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}}, ::Val{true})\n    @ ForwardDiff C:\\Users\\Bernt_Lie\\.julia\\packages\\ForwardDiff\\PcZ48\\src\\jacobian.jl:21\n [17] jacobian(f::Function, x::Vector{Float64}, cfg::ForwardDiff.JacobianConfig{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2, Vector{ForwardDiff.Dual{ForwardDiff.Tag{SciMLBase.UJacobianWrapper{true, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, Float64, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}}, Float64}, Float64, 2}}})\n    @ ForwardDiff C:\\Users\\Bernt_Lie\\.julia\\packages\\ForwardDiff\\PcZ48\\src\\jacobian.jl:19\n [18] (::ModelingToolkit.var\"#358#367\"{UnitRange{Int64}, UnitRange{Int64}, Vector{ModelingToolkit.ParameterIndex{SciMLStructures.Tunable, Int64}}, Vector{SymbolicUtils.BasicSymbolic{Real}}, ModelingToolkit.var\"#356#364\"{MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#10936873250485650685\"), Symbol(\"##arg#12853417078996959593\"), :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0xdb453d6f, 0x8ce078e3, 0xf0a30935, 0x139cbd07, 0xbba648b8), Nothing}, SymbolicIndexingInterface.ParameterHookWrapper{SymbolicIndexingInterface.MultipleSetters{Vector{SymbolicIndexingInterface.SetParameterIndex{ModelingToolkit.ParameterIndex{SciMLStructures.Tunable, Int64}}}}, Vector{SymbolicUtils.BasicSymbolic{Real}}}, ModelingToolkit.var\"#355#363\"}, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, NonlinearFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#648\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x11ce7c29, 0x6f65c7e8, 0x0fb6ac7c, 0x343656a1, 0xca307b6b), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x58b56277, 0x73127dde, 0x68c0af47, 0x517d1f4b, 0x707f7aca), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{NonlinearSystem}, Nothing, NonlinearSystem, Vector{Float64}}, ModelingToolkit.var\"#fn#366\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#5964805160111424296\"), Symbol(\"##arg#9353732160355970344\")), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x6579d8b3, 0x45aaa53d, 0xc45bd7e9, 0xae240d39, 0xf23e180a), Nothing}}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#10936873250485650685\"), Symbol(\"##arg#12853417078996959593\"), :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0xbcec8039, 0xc13893b9, 0xe9fd9bf0, 0xd326ed21, 0x0dd80d24), Nothing}, ForwardDiff.Chunk{2}, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}, Bool, GeneralizedFirstOrderAlgorithm{nothing, :TrustRegion, Missing, NonlinearSolve.GenericTrustRegionScheme{NonlinearSolve.RadiusUpdateSchemes.__Simple, Rational{Int64}, Rational{Int64}, Rational{Int64}, Rational{Int64}, Rational{Int64}, Nothing, Nothing, Nothing, Nothing}, Dogleg{NewtonDescent{Nothing, typeof(NonlinearSolve.DEFAULT_PRECS)}, SteepestDescent{Nothing, typeof(NonlinearSolve.DEFAULT_PRECS)}}, Nothing, Nothing, Nothing}, ODESystem})(u::Vector{Float64}, p::Dict{Num, Float64}, t::Float64)\n    @ ModelingToolkit C:\\Users\\Bernt_Lie\\.julia\\packages\\ModelingToolkit\\UXr3S\\src\\systems\\abstractsystem.jl:2383\n [19] linearize(sys::ODESystem, lin_fun::ModelingToolkit.var\"#358#367\"{UnitRange{Int64}, UnitRange{Int64}, Vector{ModelingToolkit.ParameterIndex{SciMLStructures.Tunable, Int64}}, Vector{SymbolicUtils.BasicSymbolic{Real}}, ModelingToolkit.var\"#356#364\"{MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#10936873250485650685\"), Symbol(\"##arg#12853417078996959593\"), :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0xdb453d6f, 0x8ce078e3, 0xf0a30935, 0x139cbd07, 0xbba648b8), Nothing}, SymbolicIndexingInterface.ParameterHookWrapper{SymbolicIndexingInterface.MultipleSetters{Vector{SymbolicIndexingInterface.SetParameterIndex{ModelingToolkit.ParameterIndex{SciMLStructures.Tunable, Int64}}}}, Vector{SymbolicUtils.BasicSymbolic{Real}}}, ModelingToolkit.var\"#355#363\"}, ODEFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#815\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x68d7fc22, 0x9cd0330d, 0x51936f95, 0xda8a0357, 0xa6ac43de), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x077ceea2, 0x254bf500, 0x74c8eda1, 0x54c835c5, 0x5d3dd8d7), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{ODESystem}, Nothing, ODESystem, Nothing, Nothing}, NonlinearFunction{true, SciMLBase.FullSpecialize, ModelingToolkit.var\"#f#648\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x11ce7c29, 0x6f65c7e8, 0x0fb6ac7c, 0x343656a1, 0xca307b6b), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x58b56277, 0x73127dde, 0x68c0af47, 0x517d1f4b, 0x707f7aca), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.ObservedFunctionCache{NonlinearSystem}, Nothing, NonlinearSystem, Vector{Float64}}, ModelingToolkit.var\"#fn#366\"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#5964805160111424296\"), Symbol(\"##arg#9353732160355970344\")), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0x6579d8b3, 0x45aaa53d, 0xc45bd7e9, 0xae240d39, 0xf23e180a), Nothing}}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(Symbol(\"##arg#10936873250485650685\"), Symbol(\"##arg#12853417078996959593\"), :t), ModelingToolkit.var\"#_RGF_ModTag\", ModelingToolkit.var\"#_RGF_ModTag\", (0xbcec8039, 0xc13893b9, 0xe9fd9bf0, 0xd326ed21, 0x0dd80d24), Nothing}, ForwardDiff.Chunk{2}, MTKParameters{Vector{Float64}, Tuple{}, Tuple{}, Tuple{}}, Bool, GeneralizedFirstOrderAlgorithm{nothing, :TrustRegion, Missing, NonlinearSolve.GenericTrustRegionScheme{NonlinearSolve.RadiusUpdateSchemes.__Simple, Rational{Int64}, Rational{Int64}, Rational{Int64}, Rational{Int64}, Rational{Int64}, Nothing, Nothing, Nothing, Nothing}, Dogleg{NewtonDescent{Nothing, typeof(NonlinearSolve.DEFAULT_PRECS)}, SteepestDescent{Nothing, typeof(NonlinearSolve.DEFAULT_PRECS)}}, Nothing, Nothing, Nothing}, ODESystem}; t::Float64, op::Dict{Num, Float64}, allow_input_derivatives::Bool, p::SciMLBase.NullParameters)\n    @ ModelingToolkit C:\\Users\\Bernt_Lie\\.julia\\packages\\ModelingToolkit\\UXr3S\\src\\systems\\abstractsystem.jl:2657\n [20] linearize(sys::ODESystem, inputs::Vector{Num}, outputs::Vector{Num}; op::Dict{Num, Float64}, t::Float64, allow_input_derivatives::Bool, zero_dummy_der::Bool, kwargs::@Kwargs{})\n    @ ModelingToolkit C:\\Users\\Bernt_Lie\\.julia\\packages\\ModelingToolkit\\UXr3S\\src\\systems\\abstractsystem.jl:2708\n [21] top-level scope\n    @ c:\\Users\\Bernt_Lie\\OneDrive\\Documents\\researchUSN\\Supervisor\\PhD\\Kushila_Jayamanne\\Notebooks\\jl_notebook_cell_df34fa98e69747e1a8f8a730347b8e2f_X24sZmlsZQ==.jl:1"
}

Environment (please complete the following information):

  • Output of using Pkg; Pkg.status()
Status `C:\Users\Bernt_Lie\.julia\environments\v1.10\Project.toml`
  [6e4b80f9] BenchmarkTools v1.5.0
  [336ed68f] CSV v0.10.14
  [a6e380b2] ControlSystems v1.10.4
  [687d7614] ControlSystemsMTK v2.2.1
  [a93c6f00] DataFrames v1.6.1
  [82cc6244] DataInterpolations v6.4.0
  [0c46a032] DifferentialEquations v7.14.0
  [b964fa9f] LaTeXStrings v1.3.1
  [23fbe1c1] Latexify v0.16.5
  [2fda8390] LsqFit v0.15.0
  [add582a8] MLJ v0.20.7
  [961ee093] ModelingToolkit v9.40.0
  [16a59e39] ModelingToolkitStandardLibrary v2.12.0
  [0987c9cc] MonteCarloMeasurements v1.2.1
  [8913a72c] NonlinearSolve v3.14.0
  [6fe1bfb0] OffsetArrays v1.14.1
  [429524aa] Optim v1.9.4
  [91a5bcdd] Plots v1.40.8
  [98d1487c] PolyesterForwardDiff v0.1.2
  [f27b6e38] Polynomials v4.0.11
  [0c5d862f] Symbolics v6.11.0
  [37e2e46d] LinearAlgebra
  • Output of using Pkg; Pkg.status(; mode = PKGMODE_MANIFEST)
[32m[1mStatus[22m[39m `C:\Users\Bernt_Lie\.julia\environments\v1.10\Manifest.toml`
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  [90m[83775a58] [39mZlib_jll v1.2.13+1
  [90m[8e850b90] [39mlibblastrampoline_jll v5.11.0+0
  [90m[8e850ede] [39mnghttp2_jll v1.52.0+1
  [90m[3f19e933] [39mp7zip_jll v17.4.0+2
[36m[1mInfo[22m[39m Packages marked with [32m⌃[39m and [33m⌅[39m have new versions available. Those with [32m⌃[39m may be upgradable, but those with [33m⌅[39m are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
  • Output of versioninfo()
Julia Version 1.10.5
Commit 6f3fdf7b36 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Windows (x86_64-w64-mingw32)
  CPU: 16 × Intel(R) Core(TM) i9-9900K CPU @ 3.60GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, skylake)
Threads: 1 default, 0 interactive, 1 GC (on 16 virtual cores)
Environment:
  JULIA_NUM_THREADS = 

Additional context

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B-LIE avatar Sep 19 '24 08:09 B-LIE