Catalyst.jl
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- [x] conservation laws
- [ ] constant and BC species (explore network API interactions)
- [x] events
- [x] constraints
- [x] Showing how to use elimination of conservation laws to enable bifurcation detection.
- [x] How to unpack symbols and index solutions with them.
- [x] using
begin
andend
in the DSL - [x] Add Hodgkin-Huxley example from Juliacon.
- [ ] Dedicated units tutorial showing both DSL and symbolic interfaces.
- [ ] When appropriate cleanup and make visible MOL tutorial.
- [ ] Using array variables/parameters/species outside and in the DSL.
and from https://github.com/SciML/Catalyst.jl/issues/222
- [ ] Scaling to large reaction networks: handling parallelism and sparsity
- [ ] Choosing jump equation simulators
- [x] File I/O and reading in reaction networks
- [ ] Getting back Exprs from the systems, saving models?