NIF-Ontology
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SciCrunch
NIF Standard Ontologies (NIFSTD)
There are a number of brain parcellation schemes that we want to ingest into the ontology. Allen MBA and cocomac have been ingested (though cocomac has not been fully integrated...
- [ ] basket cell (cl has this one but the definition is bad) - [ ] calbindin neuron `hasPhenotype some 'Calb (indicator)'` - [ ] calretnin neuron `hasPhenotype some...
See https://github.com/geneontology/go-site/issues/53#issuecomment-1654601590
causing issues with some spinal cord terms
owlapi is too smart for its own good
Need to add Neuron hasSomaLocatedIn region equvalentClass Neuron hasAxonLocatedIn region and Neuron hasDendriteLocatedIn.
`NIFEXT:119 ! Olfactory epithelium main supporting cell` only has two real restrictions in the ec statement, glutate and located in MOE. If there are any other neurons that match that...
This turtle file contains the missing labels (rdfs:label) for some of the NPO anatomical terms. These will ideally be replaced by UBERON terms eventually. NOTE: This file contains the following...
Issue for keeping track of known issues as we transition. existing: https://github.com/SciCrunch/NIF-Ontology/issues/98 https://github.com/SciCrunch/NIF-Ontology/issues/83 https://github.com/SciCrunch/SciCrunch-UI/issues/901 https://github.com/SciCrunch/NIF-Ontology/issues/75 https://github.com/SciCrunch/NIF-Ontology/issues/54
Hi all - Is there any part of NIF that deals with experimental manipulations? For example, common experimental manipulations in developing animals are monocular deprivation by lid suture, enucleation (removal...
