memilio

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NAN in multivariant stochastic SEIR Model

13

### Bug description NAN in compartments in SEIR2V Model ### Version Windows ### To reproduce 1. build code 2. execute sde_seir2v_example (https://github.com/SciCompMod/memilio/blob/1009-nan-in-multivariant-seir-model/cpp/examples/sde_seir2v.cpp)  ### Relevant log output _No response_ ###...

nijawa

naming convention in epidata test folder

3

Currently some unittest files are written in camel case and some are written in snake case. All unittest files in this folder should be named `test_epidata_filename.py`, where filename is the...

patricklnz

### Feature description Add gammasurvival and LogNormDistribution and parameters loc and scale to state_age_function These adaptions are necessary in order to be able to use the distributions from the supplementary...

lenaploetzke

### Feature description Initialization method with flows for lct model, initialization method from IDE model. Can be used to generate consistent initial numbers for LCT and IDE model. ### Additional...

lenaploetzke

Don't store pointers in the ABM

1

### Motivation / Current Behaviour Storing pointers to persons and locations in the ABM is convenient for programming, since it reduces the number of function arguments. But storing indices and...

dabele

### Feature description By allowing non-identical transition rates between the subcompartments, hypoexponentially distributed sojourn times can be allowed. By adding other possible paths / transitions, one could also represent general...

lenaploetzke

### Feature description We want to implement an ODE model in which the mobility is integrated into the ODEs rather than the graph approach. This follows [Liu et al.](https://pubmed.ncbi.nlm.nih.gov/35603124/) ###...

charlie0614

### Feature description MCMC sampling is a core technique and HOPS is a lightweight MCMC library that would allow us to sample parameters in high-dimensional spaces. @hannemann-tamas If the parameter-gradients...

qacwnfq

# Changes and Information Please **briefly list the changes** (main added features, changed items, or corrected bugs) made: - - - If need be, add additional information and what the...

MaxBetzDLR

Provide minimal boost version with limited functionality

4

### Feature description Provide a minimal boost version. Functionality that requires more boost parts than provided should not be built. This currently affects some functions in the file epidemiology/state_age_function.h. Discussion:...

lenaploetzke