cluster_benchmarking_code

cluster_benchmarking_code copied to clipboard

README Single Cell Clustering Benchmarking Project

goldstandard: Includes all code for the benchmarking analysis of gold standard dataset: GSE111108 programmes: Contains folder algorithms (R 3.4.3) and algorithm_new (R 3.5.0) with code for all clustering tools used silverstandard: Includes all code for the benchmarking analysis of silver standard datasets: GSE115189, 10xGenomics datasets, TENxPBMCData (https://support.10xgenomics.com/single-cell-gene-expression/datasets) parameters: Includes all parameters and R versions metaanlysis: code and data for meta analysis