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Improve error message for no bridge found
Hi,
I run Gretel on different datasets. I've got this error message :
[FAIL] Unable to recover pairwise evidence concerning SNP #15 at position 1077 Gretel needs every SNP to appear on a read with at least one other SNP, at least once. There is no read in your data set that bridges SNP #15 with any of its neighbours.
However, when I look at my datafile with IGV, I can see multiple reads which have 2 SNPs : screenshot
Am I missing something ? Thanks !