Sabry Razick

Thank you for the answer. I am setting up wtdbg on our HPC cluster. The processing is submitted as a job. Each job should specify how much resources needed. For...

Thank you very much I will try this.

This is the comparison when using ` --minimal-output ` and before. wtdbg2 -t 8 -x rs -X 32 -g 32g -L 5000 -i ${INPUT_FILE} -fo axolotl | JobName | AllocCPUS|...

`--minimal-output` processing becomes slower, for reasons I do not understand so it is not giving me the outcome I was expecting. Which is to do more work on memory and...

I was able to use your software to optimally use our HPC setup using a sample of Axolotl data. Thank you for that help. However, now when handling the real...

What type of help do you need @psteinb. The link https://github.com/hpc-carpentry/hpc-intro/issues/lesson-outline.md directs me to a blank page

Regarding the Dedicated Transfer Nodes callout , shall we move it to a snippet, where site specific node configurations can be included.

I faced the same issue and my solution was to remove hhsuite from conda and then compile my own. We use the EasyBuild module system and I am using HH-suite/3.3.0-foss-2020a...

I am using CUDA11 with NVIDIA A100, so can not say for sure if CUDA 10 is an issue. I did also hit the same error you reported "hhalignment.cpp 223"...

Version is exactly the same. I complied it from source code instead of the per-compiled binary in conda. Yes the path needed to be set correctly. For me this was...