Simon Gene Gottlieb

Super seeded by #3062

@smehringer will overtake this PR and check if this is still an performance improvement.

This should produce an identical index, resulting in no impact of the search. The construction itself will have a different runtime, which is hard to predict. An increase of 30min...

> Hey, thanks for the PR! In general I like the idea of mixing the short syntax with additional arguments and think this is a good approach in doing so....

> Thanks, the changes look good, just want to make sure that the test actually does what it should. One thing that I notice from the readme changes is that...

Hi Jappy0 Thank you for your report. There is indeed a design flaw in the `align_pairwise` method. It is not possible for it to report sequence ids. Instead it is...

hi Vinegang 1. any chance you can try to run it with more memory? 2. Any chance you can make the data (fastq/fasta files) available to us? How long was...

Hi @metaphysicser The class `seqan2::Gaps` doesn't hold the sequence itself, but only decorations around a sequence. The sequence itself must be stored such that it outlives the `seqan2::Gaps` instances. You...

Hey, I couldn't reproduce this on my arch linux machine. Can you tell me the exact git commit version, you are using? The line `C++ Concepts support: via -std=c++20` is...

I can reproduce this. There seems to be an error with seqan3 3.2.0 release. Looking at the cmake documentation, I am not sure why it is working on the current...